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Irradiation-driven molecular dynamics: a review

The Journal of Physical Chemistry B - September 2, 2021

Magnetic sensitivity of cryptochrome 4 from a migratory songbird

Introducing VIKING: A Novel Online Platform for Multiscale Modeling. V.Korol et al. ACS Omega, 5, 2, 1254-1260 (2020)

Prechondrogenic {ATDC5} cell attachment and differentiation on graphene foam; modulation by surface functionalization with fibronectin, S.M. Frahs et al, ACS Applied Materials and Interfaces 11, pp.41906-41924 (2019)

Et radikalt kompas viser fugelene vej. E. Sjulstok, C. Nielsen, I.A. Solov'yov. Aktuel Naturvidenskab 5, pp 30-33, (2018)

Atomistic Insights into Cryptochrome Interprotein Interactions. Sarafina M. Kimø, Ida Friis, Ilia A. Solov’yov, Biophysical Journal 115, 616-628, 2018

Electron transfer from ascorbic acid to a photo-activated state of cryptochrome could enhance the ability of the protein to respond to the Earth's magnetic field and so result in a more efficient magnetic compass sensor in night-migratory songbirds.

Charge Transfer at the Qo‑Site of the Cytochrome bc1 Complex Leads to Superoxide Production. Adrian Bøgh Salo, Peter Husen, Ilia A. Solov’yov. J. Phys. Chem. B, 121: 1771−1782, 2017.

Mechanism of the Primary Charge Transfer Reaction in the Cytochrome bc1 Complex. Angela M. Barragan, Klaus Schulten, Ilia A. Solov'yov. J. Phys. Chem. B, 120: 11369−11380, 2016.

Studying chemical reactions in biological systems with MBN Explorer: implementation of molecular mechanics with dynamical topology. Image credit: Ilia A. Solov’yov, Andrey V. Solov’yov. Eur. Phys. J. D, 70: 1-12, 2016.

Spontaneous Binding of Molecular Oxygen at the Qo-Site of the bc1 Complex Could Stimulate Superoxide Formation. Image credit: P. Husen, I.A. Solov'yov. URL: <a href='http://pubs.acs.org/doi/abs/10.1021/jacs.6b04849'>http://pubs.acs.org/doi/abs/10.1021/jacs.6b04849</a>.

Electron spin relaxation in cryptochrome-based magnetoreception. Image credit: Ilia A. Solov'yov, P. J. Hore, Daniel R. Kattnig. URL: <a href='http://dx.doi.org/10.1039/C5CP06731F'>http://dx.doi.org/10.1039/C5CP06731F</a>.

Publications

Year

Title

Author(s)

Abstract contains

Journal(s)

2024

0, (2024)

Spin Dynamics of Radical Pairs Using the Stochastic Schrödinger Equation in MolSpin, Gediminas Jurgis Pa\vzera, Thomas P. Fay, Ilia A. Solov'yov, P. J. Hore, Luca Gerhards, Journal of Chemical Theory and Computation, 20, 8412-8421, (2024)

Quantum phenomena in biological system, Pedro H. Alvarez, Luca Gerhards, Ilia A. Solov'yov, Marcos C. de Oliveira, Frontiers in Quantum Science and Technology, 3, 1466906-(1-13), (2024)

Nuclear hyperpolarization in electron-transfer proteins: Revealing unexpected light-induced 15N signals with field-cycling magic-angle spinning NMR, Patrick Kurle-Tucholski, Luca Gerhards, Yonghong Ding, Yunmi Kim, Irina S. Anisimova, A. Alia, Ilia A. Solov'yov, Jörg Matysik, Journal of Magnetic Resonance Open, 21, 100168, (2024)

The Effect of Spin Relaxation on Magnetic Compass Sensitivity in ErCry4a, Gesa Grüning, Luca Gerhards, Siu Ying Wong, Daniel R. Kattnig, Ilia A. Solov'yov, ChemPhysChem, e202400129, 1-14, (2024)

The Transition of Photoreceptor Guanylate Cyclase Type 1 to the Active State, Manisha Kumari Shahu, Fabian Schuhmann, Siu Ying Wong, Ilia A. Solov'yov, Karl-Wilhelm Koch, Biochemistry, 63, 2131-2140, (2024)

Spurious negative eigenvalues of numerical variance-covariance matrices in many-body systems correlate with the existence of frozen degrees of freedom, Jonathan Hungerland, Ilia A. Solov'yov, Fabian Schuhmann, Physica Scripta, 99, 085249-(1-8), (2024)

A Computer Laboratory for the Calculation of the Heat Capacity of a Peptide Unfolding Transition, Lau Blom Grøndahl, Fabian Schuhmann, Dennis Bruhn, Vikas Dubey, Ilia A. Solov'yov, Himanshu Khandelia, The Biophysicist, 5, 67-80, (2024)

Different receptor models show differences in ligand binding strength and location: a computational drug screening for the tick-borne encephalitis virus, Felicitas Finke, Jonathan Hungerland, Ilia A. Solov'yov, Fabian Schuhmann, Molecular Diversity, https://doi.org/10.1007/s11030-024-10850-8, (2024)

External RF-EMF alters cell number and ROS balance possibly via the regulation of NADPH metabolism and apoptosis, Sheung-Ching Chow, Yang Zhang, Raymond W. M. Ng, Shu-Yuen Ron Hui, Ilia A. Solov'yov, Wing-Yee Lui, Frontiers in Public Health, 12, 1425023-(1-11), (2024)