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Electron transfer from ascorbic acid to a photo-activated state of cryptochrome could enhance the ability of the protein to respond to the Earth's magnetic field and so result in a more efficient magnetic compass sensor in night-migratory songbirds.

Charge Transfer at the Qo‑Site of the Cytochrome bc1 Complex Leads to Superoxide Production. Adrian Bøgh Salo, Peter Husen, Ilia A. Solov’yov. J. Phys. Chem. B, 121: 1771−1782, 2017.

Mechanism of the Primary Charge Transfer Reaction in the Cytochrome bc1 Complex. Angela M. Barragan, Klaus Schulten, Ilia A. Solov'yov. J. Phys. Chem. B, 120: 11369−11380, 2016.

Studying chemical reactions in biological systems with MBN Explorer: implementation of molecular mechanics with dynamical topology. Image credit: Ilia A. Solov’yov, Andrey V. Solov’yov. Eur. Phys. J. D, 70: 1-12, 2016.

Spontaneous Binding of Molecular Oxygen at the Qo-Site of the bc1 Complex Could Stimulate Superoxide Formation. Image credit: P. Husen, I.A. Solov'yov. URL: <a href='http://pubs.acs.org/doi/abs/10.1021/jacs.6b04849'>http://pubs.acs.org/doi/abs/10.1021/jacs.6b04849</a>.

Electron spin relaxation in cryptochrome-based magnetoreception. Image credit: Ilia A. Solov'yov, P. J. Hore, Daniel R. Kattnig. URL: <a href='http://dx.doi.org/10.1039/C5CP06731F'>http://dx.doi.org/10.1039/C5CP06731F</a>.

Identification of Ubiquinol Binding Motifs at the Qo-Site of the Cytochrome bc1 Complex; Image credit: Angela M. Barragan, Klaus Schulten, Ilia A. Solov'yov. URL: <a href='http://pubs.acs.org/doi/abs/10.1021/jp510022w'>http://pubs.acs.org/doi/abs/10.1021/jp510022w</a>

Efficient 3D Kinetic Monte Carlo Method for Modeling of Molecular Structure and Dynamics. Image credit: Mikhail Panshenskov, Ilia A. Solov'yov and Andrey V. Solov'yov. URL: <a href='http://onlinelibrary.wiley.com/doi/10.1002/jcc.23613/abstract'>http://onlinelibrary.wiley.com/doi/10.1002/jcc.23613/abstract</a>.

An Introduction to Cluster Science. Image credit: Paul-Gerhard Reinhard, Eric Suraud, Phuong Mai Dinh, Ilia A. Solov'yov, Andrey V. Solov'yov. URL: <a href='http://www.wiley.com/WileyCDA/WileyTitle/productCd-3527411186.html'>http://www.wiley.com/WileyCDA/WileyTitle/productCd-3527411186.html</a>.

An atomic model of the human immunodeficiency virus-1 (HIV-1) capsid within a representation of the viral envelope. Image credit: Juan R. Perilla, John Stone, Ilia A. Solov'yov, Olga Svinarski, Klaus Schulten and Peijun Zhang. URL: <a href='http://www.nature.com/nature/journal/v497/n7451/index.html'>http://www.nature.com/nature/journal/v497/n7451/index.html</a>

Decrypting Cryptochrome: Revealing the Molecular Identity of the Photoactivation. Image credit: Ilia A. Solov'yov, Tatiana Domratcheva, Abdul Rehaman Moughal Shahi, and Klaus Schulten. URL: <a href='http://pubs.acs.org/doi/abs/10.1021/ja3074819'>http://pubs.acs.org/doi/abs/10.1021/ja3074819</a>

MesoBioNano Explorer — A universal program for multiscale computer simulations of complex molecular structure and dynamics. Image credit: Ilia A. Solov'yov, Alexander V. Yakubovich, Pavel V. Nikolaev, Ilya Volkovets, Andrey V. Solov'yov. URL: <a href='http://onlinelibrary.wiley.com/doi/10.1002/jcc.23086/abstract'>http://onlinelibrary.wiley.com/doi/10.1002/jcc.23086/abstract</a>

Vibrationally assisted electron transfer mechanism of olfaction: myth or reality? Image credit: Ilia A. Solov'yov, Po-Yao Chang, and Klaus Schulten. URL: <a href='http://www.ncbi.nlm.nih.gov/pubmed/22899100'>http://www.ncbi.nlm.nih.gov/pubmed/22899100</a>

How birds and other animals orient in the Earth magnetic field. Image credit: Ilia A. Solov'yov, Klaus Schulten, and Walter Greiner. Physik Journal, 9:23-28, 2010

Magnetoreception through cryptochrome may involve superoxide. Image credit: Ilia A. Solov'yov and Klaus Schulten. Biophysical Journal, 96:4804-4813, 2009.

Publications

Year

Title

Author(s)

Abstract contains

Journal(s)

2018

0, 0, (2018)

Double-Cone Localization and Seasonal Expression Pattern Suggest a Role in Magnetoreception for European Robin Cryptochrome 4, Anja Günther, Angelika Einwich, Emil Sjulstok, Regina Feederle, Petra Bolte, Karl-Wilhelm Koch, Ilia A. Solov'yov, Henrik Mouritsen, Current Biology, 28, 211-223, (2018)

Molecular Insights into Variable Electron Transfer in Amphibian Cryptochrome, Emil Sjulstok, Gesa Lüdemann, Tomáš Kubař, Marcus Elstner, Ilia A. Solov'yov, Biophysical Journal, 114, https://doi.org/10.1016/j.bpj.2018.04.014, (2018)

Autoantibody Profiling in Lupus Patients using Synthetic Nucleic Acids, Martin Klecka, Christina Thybo, Claudia Macaubas, Ilia Solov'yov, Julia Simard, Imelda Maria Balboni, Emily Fox, Anne Voss, Elizabeth D. Mellins, Kira Astakhova, Scientific Reports, 8, 5554, (2018)

StUbEx PLUS-A Modified Stable Tagged Ubiquitin Exchange System for Peptide Level Purification and In-Depth Mapping of Ubiquitination Sites, Vyacheslav Akimov, Louise C. B. Olsen, Sten V. F. Hansen, Inigo Barrio-Hernandez, Michele Puglia, Søren S. Jensen, Ilia A. Solov'yov, Irina Kratchmarova, Blagoy Blagoev, Journal of Proteome Research, 17, 296-304, (2018)

2017

0, 0, (2017)

Ascorbic acid may not be involved in cryptochrome-based magnetoreception, Claus Nielsen, Daniel R. Kattnig, Emil Sjulstok, P. J. Hore, Ilia A. Solov'yov, Journal of the Royal Society Interface, 14, 20170657, (2017)

Computational reconstruction reveals a candidate magnetic biocompass to be likely irrelevant for magnetoreception, Ida Friis, Emil Sjulstok, Ilia A. Solov'yov, Scientific Reports, 7, 13908, (2017)

Polarizable Density Embedding: A Solution to the Electron Spill-Out Problem in Multiscale Modeling, Reinholdt, Peter, Kongsted, Jacob, Olsen, Jógvan Magnus Haugaard, The journal of physical chemistry letters, 8, 5949--5958, ACS Publications, (2017)

MBN Explorer and MBN Studio Tutorials, Ilia A. Solov'yov, Gennady Sushko, Alexey Verkhovtsev, Andrey Korol, Andrey V. Solov'yov, Frankfurt am Main, Germany, MesoBioNano Science Publishing, (2017)