VIKING | QuantBioLab

VIKING (Scandinavian Online Kit For Nanoscale Modeling) is an convenient user-friendly online interface for running various simulations using popular software packages. VIKING is tailored for addressing specific biomedical and biochemical tasks through computer simulations:

Molecular dynamics (using NAMD)
Quantum chemistry aomic and molecular properties calculation (Gaussian09)
Quantum chemistry spectroscopy (Gaussian09)
Virtual screening (using AutoDock Vina)
CRISPR INDEL profiling - (using tool ProfileIt™, sponsored by COBO Technologies).

Recent Publications

Frontiers in Multiscale Modeling of Photoreceptor Proteins, Maria-Andrea Mroginski, Suliman Adam, Gil S. Amoyal, Avishai Barnoy, Ana-Nicoleta Bondar, Veniamin A. Borin,Jonathan R. Church, Tatiana Domratcheva, Bernd Ensing, Francesca Fanelli, Nicolas Ferré, Ofer Filiba, Laura Pedraza-González, Ronald González, Cristina E. González-Espinoza, Rajiv K. Kar, Lukas Kemmler, Seung Soo Kim, Jacob Kongsted, Anna I. Krylov, Yigal Lahav, Michalis Lazaratos, Qays NasserEddin, Isabelle Navizet, Alexander Nemukhin, Massimo Olivucci, Jógvan Magnus Haugaard Olsen, Alberto Párez de Alba Ort\'\iz, Elisa Pieri, Aditya G., Photochemistry and Photobiology, 154, DOI: 10.1111/php.13372, (2021)

Introducing Pep McConst — A user-friendly peptide modeler for biophysical applications, Fabian Schuhmann, Vasili Korol, Ilia A. Solov'yov, Journal of Computational Chemistry, 42, 572-580, (2021)

Introducing VIKING: A Novel Online Platform for Multiscale Modeling, Vasili Korol, Peter Husen, Emil Sjulstok, Claus Nielsen, Ida Friis, Anders Frederiksen, Adrian Bøgh Salo, Ilia A. Solov'yov, ACS Omega, 5, 1254-1260, (2020)